郑会全, 胡德活, 王润辉, 吴淑娟. 速生型杉木SRAP遗传差异分析[J]. 西南林业大学学报, 2017, 37(3): 14-20. DOI: 10.11929/j.issn.2095-1914.2017.03.003
引用本文: 郑会全, 胡德活, 王润辉, 吴淑娟. 速生型杉木SRAP遗传差异分析[J]. 西南林业大学学报, 2017, 37(3): 14-20. DOI: 10.11929/j.issn.2095-1914.2017.03.003
Huiquan Zheng, Dehuo Hu, Runhui Wang, Shujuan Wu. Genetic Divergence of the Chinese Fir Fast-growing Genotypes Revealed by SRAP Markers[J]. Journal of Southwest Forestry University, 2017, 37(3): 14-20. DOI: 10.11929/j.issn.2095-1914.2017.03.003
Citation: Huiquan Zheng, Dehuo Hu, Runhui Wang, Shujuan Wu. Genetic Divergence of the Chinese Fir Fast-growing Genotypes Revealed by SRAP Markers[J]. Journal of Southwest Forestry University, 2017, 37(3): 14-20. DOI: 10.11929/j.issn.2095-1914.2017.03.003

速生型杉木SRAP遗传差异分析

Genetic Divergence of the Chinese Fir Fast-growing Genotypes Revealed by SRAP Markers

  • 摘要: 采用SRAP分子标记技术对32个速生型杉木无性系进行基因分型,进而作遗传多态性与遗传相似性及UPGMA聚类分析。结果表明:21对SRAP引物组合共扩增出237个清晰、稳定的谱带,其中多态性条带214条;不同引物组合对无性系的辨别力有所差异,介于10~31之间;在群体水平上,多态性条带比例达90.3%,平均多态信息含量(PIC)和基因多样性(GD)值分别为0.218 7、0.268 2,检测到的平均等位基因数(Na)、平均有效等位基因数(Ne)、香农信息指数(I)及平均期望杂合度(He)依次为1.903、1.392、0.380、0.243,群体遗传多态性应处中等水平;另外,95.5%的无性系遗传相似性分布在0.400 0~0.599 9范围,构建的SRAP UPGMA聚类图从分子水平上度量了各速生无性系遗传距离。综合各数据发现,经速生性选择后,参试的32个杉木无性系仍具有较大的遗传差异性,组内再选配杂交可行。

     

    Abstract: In this study, sequence-related amplified polymorphism (SRAP) markers were used to genotype 32 fast-growing Chinese fir (Cunninghamia lanceolata) clones, and therefore evaluated the polymorphisms and genetic similarity, and generated a UPGMA dendrogram of the clones. The result indicated that 21 SRAP primer combinations produced 237 clear and stable bands, and notably, 214 of these were polymorphic. Different primer combinations seemed to have a divergent discrimination power in clones with NG (number of genotype identified) of 10-31. Based on the SRAP markers, the population diversity parameters of PPB (percentage of polymorphism band), PIC (polymorphism information content), GD (gene diversity), Na (number of different alleles), Ne (number of effective alleles), I (Shannon′s information index) and He (expected heterozygosity) were found to be 90.3%, 0.218 7, 0.268 2, 1.903、1.392、0.380 and 0.243 respectively, reflecting a moderate degree of diversity in present Chinese fir collection. Impressively, the SRAP-based UPGMA tree help clarify the molecular genetic distance of the clones with a pairwise genetic similarity coefficient of 0.400 0-0.599 9 for most (95.5%) of the clone pairs. Briefly, it could be concluded that there still has large amount of variation among clones (n=32), albeit a restricted selection for their growth traits (fast-growing). Intra-population (n=32) reselection and crossing is rather promising for this collection.

     

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