中国樟树初级核心种质取样方法与策略研究

Sampling Strategy of Primary Core Germplasm of Cinnamomum camphora in China

  • 摘要: 为了优化樟树种质资源保存策略,提高利用效率,利用872份中国樟树种质资源的苗高、地径、种子大小和千粒质量4个表型数据为材料,从分组方法、组内抽样比例方法、聚类方法、抽样策略、总体取样比例等方面进行中国樟树初级核心种质取样策略研究。结果表明:不同聚类方法和取样策略下采用4 种系统取样法构建的核心种质的效果是不同的,在确定最长距离法和优先取样策略的前提下,组内采用对数比例法所构建的樟树核心种质效果较好。应用最长距离法进行聚类筛选出的核心种质的极差符合率和变异系数变化率相对高于其他6种方法,是构建樟树核心种质的最佳聚类方法;优先取样法构建的核心种质的遗传多样性指数、表型频率方差、表型方差和变异系数变化率的值都是最佳的。在25%的取样比例下,遗传多样性指数、表型保留比例和表型方差的值最高,表型频率方差最小,是构建樟树初级核心种质的最佳取样比例。综合6个参数的分析结果,最终确定种源-对数比例-最长距离法聚类-优先取样法为构建中国樟树核心种质的优选取样策略。

     

    Abstract: In order to optimize the conservation strategy of camphor tree germplasm resources and improve the utilization efficiency, we used 4 phenotypic data of 872 camphor trees in China, including seedling height, ground diameter, seed size and weight, to research the primary core germplasm sampling strategy of camphor tree in China in this study, from the aspects including grouping method, intra-group sampling proportional method, clustering method, sampling strategy, and overall sampling ratio. The results showed that the effect of the core germplasm constructed was different by 4 kinds of systematic sampling methods under different clustering methods and sampling strategies. Under the premise of determining the longest distance method and the preferential sampling strategy, the core germplasm construction of camphor tree was better by the logarithmic proportion method in the group. The range coincidence rate and coefficient of variation rate of the core germplasm screened by the longest distance method were higher than those of the other 6 methods, which was the best clustering method. The values of genetic diversity index, phenotypic frequency variance, phenotypic variance and the variable rate of coefficient of variation of core germplasm constructed by the preferential sampling method were all the best. The genetic diversity index, phenotypic retention ratio and phenotypic variance were the highest and the phenotypic frequency variance was the lowest at 25% sampling ratio, indicating which was the best sampling ratio to construct the primary core germplasm of camphor tree. Based on the analysis results of 6 parameters, the provenance-logarithmic proportion-longest distance clustering-preferential sampling method is finally determined as the optimal sampling strategy for the construction of core germplasm of camphor tree in China.

     

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