本文排版定稿已在中国知网网络首发,如需阅读全文请打开知网首页,并搜索该论文题目即可查看。
筇竹地下茎幼芽生长发育的解剖学及转录组学分析
Anatomical and Transcriptomic Analysis of the Growth and Development of Young Rhizome Buds in Chimonobambusa tumidissinoda
-
摘要: 为探讨筇竹地下茎幼芽的生长发育过程,选取地下茎上长度<0.2 cm(S1)、0.2~0.5 cm(S2)、0.5~1.0 cm(S3)、1.0~1.5 cm(S4)、1.5~4.5 cm(S5)的幼芽为研究对象,采用石蜡切片和高通量测序技术对其进行解剖和转录组层面的观察与分析。结果表明:解剖观察发现,随着幼芽的生长发育,顶端分生组织隆起角度变小,在S5阶段可观察到腋芽原基、节和节间的形成与分化。对不同发育阶段样品的转录组数据进行差异表达基因分析发现,GO和KEGG主要富集到mRNA结合、结构分子活性、核剪切体、对细胞分裂素的响应等与生物体基本生命活动的相关功能,以及代谢、次生代谢物生物合成、激素信号转导等与生长发育相关途径。对地下茎幼芽激素信号转导相关基因鉴定及PPI分析发现,CtuGID1、CtuDELLA、CtuPP2C3、CtuB-ARR为地下茎幼芽激素信号转导途径中的核心节点,这些基因可能对筇竹地下茎幼芽的生长发育具有重要影响。Abstract: To investigate the growth and development process of young rhizome buds in Chimonobambusa tumidissinoda, in this study, rhizome buds were divided into five developmental stages: <0.2 cm (S1), 0.2-0.5 cm (S2), 0.5-1.0 cm (S3), 1.0-1.5 cm (S4), and 1.5-4.5 cm (S5). The dynamic changes in anatomy and transcriptome during bud development were observed and analyzed by the Wax-section and RNA-seq techniques. The findings are as follows: i) Anatomical observations showed that as the buds grew and developed, the angle of the apical meristem gradually decreased. In the S5 stage, the formation and differentiation of the axillary bud primordium, node, and internode were observed in the rhizome buds. ii) Comparative transcriptomic analysis of differentially expressed genes across the stages revealed that GO and KEGG enrichment analyses primarily highlighted functions related to fundamental biological activities, including mRNA binding, structural molecule activity, nuclear dicing body, and response to cytokinin, as well as pathways related to growth and development, including metabolism, biosynthesis of secondary metabolites, and plant hormone signal transduction. iii) The identification of gene related to hormone signal transduction, and protein-protein interaction (PPI) analysis showed that, CtuGID1 and CtuDELLA in the GA signal transduction pathway, CtuPP2C3 of the PP2C gene family in the ABA signal transduction pathway, and CtuB-ARR in the CK signal transduction pathway are the core nodes in the hormone signal transduction pathways of rhizome buds. These genes may have a significant impact on the rhizome buds development in C. tumidissinoda.
下载: