许雷, 刘一星, 方连玉. 大青杨纤维素合成酶PuCesA6基因cDNA的克隆及序列分析[J]. 西南林业大学学报, 2012, 32(5): 26-32. DOI: 10.3969/j.issn.2095-1914.2012.05.006
引用本文: 许雷, 刘一星, 方连玉. 大青杨纤维素合成酶PuCesA6基因cDNA的克隆及序列分析[J]. 西南林业大学学报, 2012, 32(5): 26-32. DOI: 10.3969/j.issn.2095-1914.2012.05.006
XU Lei1, LIU Yixing1, FANG Lianyu2. Cloning and Sequence Character Analysis of FullLength cDNA of Cellulose Synthase PuCesA6 from Populus ussuriensis[J]. Journal of Southwest Forestry University, 2012, 32(5): 26-32. DOI: 10.3969/j.issn.2095-1914.2012.05.006
Citation: XU Lei1, LIU Yixing1, FANG Lianyu2. Cloning and Sequence Character Analysis of FullLength cDNA of Cellulose Synthase PuCesA6 from Populus ussuriensis[J]. Journal of Southwest Forestry University, 2012, 32(5): 26-32. DOI: 10.3969/j.issn.2095-1914.2012.05.006

大青杨纤维素合成酶PuCesA6基因cDNA的克隆及序列分析

Cloning and Sequence Character Analysis of FullLength cDNA of Cellulose Synthase PuCesA6 from Populus ussuriensis

  • 摘要: 以大青杨总RNA为模板,通过反转录PCR获得纤维素合成酶PuCesA6基因的全长cDNA序列。序列分析结果表明:其cDNA序列全长3778bp,开放读码框序列3264bp,共编码1087个氨基酸。PuCesA6基因编码的氨基酸序列具备被子植物纤维素合酶基因的特征:锌指结构域、高变区I(HVR-I)、高变区II(HVR-II)与β-糖苷转移酶有关的保守结构域以及8个跨膜区。通过多氨基酸序列比对发现,与光皮桦BlCesA5相似度最高,为89%;其次是玉米ZmCesA8,相似度为80%,且8类CesA的锌指结构与C末端氨基酸序列高度保守。34种CesA蛋白序列的分子进化分析表明,大青杨PuCesA6蛋白与欧洲颤杨PtrCesA6蛋白亲缘关系最近,相似度达99%;和光皮桦BlCesA5、大桉EgCesA6蛋白同聚为一类。

     

    Abstract: The total RNA extracted from Populus ussuriensis leaves was used for RT-PCR, then the fulllength cDNA sequence of cellulose synthase gene (PuCesA6) was amplified. The sequence analysis showed that the fulllength cDNA of PuCesA6 consisted of 3778 bp, with an ORF of 3264 bp encoding 1087 amino acids. The amino acid sequences of the PuCesA6 showed characteristics of cellulose synthase gene of the angiospermous plant species, i.e., it contained a ringtype zincfinger domain, followed by a hyper variable region I (HVRI) and a hyper variable region II (HVRII), a conserved domain related to βglycoside transferase and 8 transmembrane domains. Homology analysis of the deduced amino acid showed 89% identity to BlCesA5 from Betula luminifera and 80% identity to ZmCesA8 from Zea mays. The sequence analyses results also showed that the ringtype zincfinger domain of 8 types of cellulose synthase gene CesA and the amino acid sequences at Cterminal domain were highly conservative.

     

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